aligner v. 2 Search Results


aligner v. 2  (CodonCode corporation)
90
CodonCode corporation aligner v. 2
Aligner V. 2, supplied by CodonCode corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/aligner v. 2/product/CodonCode corporation
Average 90 stars, based on 1 article reviews
aligner v. 2 - by Bioz Stars, 2026-05
90/100 stars
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bowtie v.2.0.6 alignment tool  (Broad Institute Inc)
90
Broad Institute Inc bowtie v.2.0.6 alignment tool
Bowtie V.2.0.6 Alignment Tool, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bowtie v.2.0.6 alignment tool/product/Broad Institute Inc
Average 90 stars, based on 1 article reviews
bowtie v.2.0.6 alignment tool - by Bioz Stars, 2026-05
90/100 stars
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automated alignment program prime v. 2.1  (Schrodinger LLC)
90
Schrodinger LLC automated alignment program prime v. 2.1
Automated Alignment Program Prime V. 2.1, supplied by Schrodinger LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automated alignment program prime v. 2.1/product/Schrodinger LLC
Average 90 stars, based on 1 article reviews
automated alignment program prime v. 2.1 - by Bioz Stars, 2026-05
90/100 stars
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program alignment of geneworks v2.0  (GeneWorks)
90
GeneWorks program alignment of geneworks v2.0
Program Alignment Of Geneworks V2.0, supplied by GeneWorks, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/program alignment of geneworks v2.0/product/GeneWorks
Average 90 stars, based on 1 article reviews
program alignment of geneworks v2.0 - by Bioz Stars, 2026-05
90/100 stars
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transcriptome aligner tophat v. 2.0.13  (Broad Institute Inc)
90
Broad Institute Inc transcriptome aligner tophat v. 2.0.13
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Transcriptome Aligner Tophat V. 2.0.13, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcriptome aligner tophat v. 2.0.13/product/Broad Institute Inc
Average 90 stars, based on 1 article reviews
transcriptome aligner tophat v. 2.0.13 - by Bioz Stars, 2026-05
90/100 stars
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star-aligner v2.5.2a  (Bluebee Inc)
90
Bluebee Inc star-aligner v2.5.2a
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Star Aligner V2.5.2a, supplied by Bluebee Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/star-aligner v2.5.2a/product/Bluebee Inc
Average 90 stars, based on 1 article reviews
star-aligner v2.5.2a - by Bioz Stars, 2026-05
90/100 stars
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condoncode aligner [v2.0.1]  (CodonCode corporation)
90
CodonCode corporation condoncode aligner [v2.0.1]
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Condoncode Aligner [V2.0.1], supplied by CodonCode corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/condoncode aligner [v2.0.1]/product/CodonCode corporation
Average 90 stars, based on 1 article reviews
condoncode aligner [v2.0.1] - by Bioz Stars, 2026-05
90/100 stars
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sequence alignment software hisat v2.0.4  (Johns Hopkins HealthCare)
90
Johns Hopkins HealthCare sequence alignment software hisat v2.0.4
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Sequence Alignment Software Hisat V2.0.4, supplied by Johns Hopkins HealthCare, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/sequence alignment software hisat v2.0.4/product/Johns Hopkins HealthCare
Average 90 stars, based on 1 article reviews
sequence alignment software hisat v2.0.4 - by Bioz Stars, 2026-05
90/100 stars
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star aligner v2.5.3a  (Gallus BioPharmaceuticals)
90
Gallus BioPharmaceuticals star aligner v2.5.3a
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Star Aligner V2.5.3a, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/star aligner v2.5.3a/product/Gallus BioPharmaceuticals
Average 90 stars, based on 1 article reviews
star aligner v2.5.3a - by Bioz Stars, 2026-05
90/100 stars
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star aligner v2.7.8a  (Lexogen GmbH)
90
Lexogen GmbH star aligner v2.7.8a
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Star Aligner V2.7.8a, supplied by Lexogen GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/star aligner v2.7.8a/product/Lexogen GmbH
Average 90 stars, based on 1 article reviews
star aligner v2.7.8a - by Bioz Stars, 2026-05
90/100 stars
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spliced transcripts alignment to a reference v2.7.10a  (Gallus BioPharmaceuticals)
90
Gallus BioPharmaceuticals spliced transcripts alignment to a reference v2.7.10a
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Spliced Transcripts Alignment To A Reference V2.7.10a, supplied by Gallus BioPharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/spliced transcripts alignment to a reference v2.7.10a/product/Gallus BioPharmaceuticals
Average 90 stars, based on 1 article reviews
spliced transcripts alignment to a reference v2.7.10a - by Bioz Stars, 2026-05
90/100 stars
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bowtie v2 aligner-based bd precisetm targeted analysis pipeline  (Becton Dickinson)
90
Becton Dickinson bowtie v2 aligner-based bd precisetm targeted analysis pipeline
Venn diagram showing the distribution of differentially expressed genes (DEGs) among the <t>transcriptomes.</t> Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.
Bowtie V2 Aligner Based Bd Precisetm Targeted Analysis Pipeline, supplied by Becton Dickinson, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bowtie v2 aligner-based bd precisetm targeted analysis pipeline/product/Becton Dickinson
Average 90 stars, based on 1 article reviews
bowtie v2 aligner-based bd precisetm targeted analysis pipeline - by Bioz Stars, 2026-05
90/100 stars
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Image Search Results


Venn diagram showing the distribution of differentially expressed genes (DEGs) among the transcriptomes. Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.

Journal: International Journal of Molecular Sciences

Article Title: Comparative Transcriptome Analysis of the Pinewood Nematode Bursaphelenchus xylophilus Reveals the Molecular Mechanism Underlying Its Defense Response to Host-Derived α-pinene

doi: 10.3390/ijms20040911

Figure Lengend Snippet: Venn diagram showing the distribution of differentially expressed genes (DEGs) among the transcriptomes. Note: AD, 56.33 mg/mL of α-pinene. AG, 214.5 mg/mL of α-pinene. CK, control.

Article Snippet: Filtered reads were aligned to the reference genome using the transcriptome aligner Tophat v. 2.0.13 (Broad Institute of MIT and Harvard, Cambridge, MA, USA).

Techniques: Control

GO assignment of the DEGs in the AD and AG transcriptomes. DEGs in the AD sample ( A ) and in the AG sample ( B ) had GO ID assignments mainly in three categories: cellular component, molecular function, and biological process.

Journal: International Journal of Molecular Sciences

Article Title: Comparative Transcriptome Analysis of the Pinewood Nematode Bursaphelenchus xylophilus Reveals the Molecular Mechanism Underlying Its Defense Response to Host-Derived α-pinene

doi: 10.3390/ijms20040911

Figure Lengend Snippet: GO assignment of the DEGs in the AD and AG transcriptomes. DEGs in the AD sample ( A ) and in the AG sample ( B ) had GO ID assignments mainly in three categories: cellular component, molecular function, and biological process.

Article Snippet: Filtered reads were aligned to the reference genome using the transcriptome aligner Tophat v. 2.0.13 (Broad Institute of MIT and Harvard, Cambridge, MA, USA).

Techniques: